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Differential absence/presence srst2 VF/AMRs » srst2_ST303_significant_VFs_fisher_v2.csv

Katie Lennard, 08/03/2020 11:57 AM

 
1
"","oddsRatio","lower","upper","pvalues","adjPvalues"
2
"PA2372",0,0,0.502119601766593,0.00288648421078912,0.00968575812953682
3
"PA3142",Inf,12.5713001498944,Inf,1.8907382168297e-10,1.18958946142202e-09
4
"PA3143",Inf,40.2169211528327,Inf,1.91874681973986e-18,1.81081731112949e-17
5
"PA3144",5.41664364663033,2.02707752689071,15.6817272780244,0.000173421260501526,0.000595150234902965
6
"PA3157",Inf,40.2169211528327,Inf,1.91874681973986e-18,1.81081731112949e-17
7
"PLES_19091",0,0,0.217293996241935,1.00934062720629e-05,3.71732767580854e-05
8
"PLES_19101",0,0,0.217293996241935,1.00934062720629e-05,3.71732767580854e-05
9
"PLES_19111",0,0,0.217293996241935,1.00934062720629e-05,3.71732767580854e-05
10
"PLES_19131",0,0,0.217293996241935,1.00934062720629e-05,3.71732767580854e-05
11
"PLES_19141",0,0,0.217293996241935,1.00934062720629e-05,3.71732767580854e-05
12
"PLES_19151",0,0,0.217293996241935,1.00934062720629e-05,3.71732767580854e-05
13
"PLES_19161",0,0,0.217293996241935,1.00934062720629e-05,3.71732767580854e-05
14
"cupC1",Inf,17.3188938017653,Inf,1.33679516318906e-12,1.12142260911971e-11
15
"exoS",Inf,5.05952591959863,Inf,4.26984027406244e-06,2.01483087932321e-05
16
"exoU",0,0,0.217293996241935,1.00934062720629e-05,3.71732767580854e-05
17
"fimT",Inf,1.68697319724561,Inf,0.00619025979329836,0.018694584575761
18
"fleI.flag",Inf,15.9585823379188,Inf,4.82963356528133e-12,3.31488485617037e-11
19
"fleP",68.5603386550097,9.9901354747605,2937.99217590685,9.17723847925926e-11,6.02505656681803e-10
20
"flgK",Inf,15.9585823379188,Inf,4.82963356528133e-12,3.31488485617037e-11
21
"flgL",Inf,1.68697319724561,Inf,0.00619025979329836,0.018694584575761
22
"fliD",Inf,15.9585823379188,Inf,4.82963356528133e-12,3.31488485617037e-11
23
"fliS",Inf,15.9585823379188,Inf,4.82963356528133e-12,3.31488485617037e-11
24
"fpvA",Inf,3.75836789338145,Inf,5.40471390888436e-05,0.000194312333390842
25
"fpvI",Inf,8.46109926961576,Inf,1.71881356180599e-08,9.61262399380387e-08
26
"fpvR",Inf,8.46109926961576,Inf,1.71881356180599e-08,9.61262399380387e-08
27
"hisF2",Inf,40.2169211528327,Inf,1.91874681973986e-18,1.81081731112949e-17
28
"hisH2",Inf,40.2169211528327,Inf,1.91874681973986e-18,1.81081731112949e-17
29
"orfN",0,0,0.15145308487394,2.93898244518169e-07,1.47928783074145e-06
30
"pilA",0,0,0.15145308487394,2.93898244518169e-07,1.47928783074145e-06
31
"pilC",Inf,1.39663126513419,Inf,0.0131459643984204,0.0389223651796369
32
"pilV",Inf,1.68697319724561,Inf,0.00619025979329836,0.018694584575761
33
"pilY2",Inf,1.68697319724561,Inf,0.00619025979329836,0.018694584575761
34
"pldA",Inf,18.8022695606236,Inf,3.57821532095083e-13,3.17829713802103e-12
35
"pvdD",Inf,8.46109926961576,Inf,1.71881356180599e-08,9.61262399380387e-08
36
"spcU",0.0495111556958665,0.00113173321014133,0.349022405277085,0.000103270462240069,0.000362647437168615
37
"vgrG3",Inf,6.05781406969241,Inf,7.29256996254322e-07,3.55218730433557e-06
38
"wbpA",Inf,40.2169211528327,Inf,1.91874681973986e-18,1.81081731112949e-17
39
"wbpB",Inf,40.2169211528327,Inf,1.91874681973986e-18,1.81081731112949e-17
40
"wbpD",Inf,40.2169211528327,Inf,1.91874681973986e-18,1.81081731112949e-17
41
"wbpE",Inf,40.2169211528327,Inf,1.91874681973986e-18,1.81081731112949e-17
42
"wbpG",Inf,40.2169211528327,Inf,1.91874681973986e-18,1.81081731112949e-17
43
"wbpH",Inf,40.2169211528327,Inf,1.91874681973986e-18,1.81081731112949e-17
44
"wbpI",Inf,40.2169211528327,Inf,1.91874681973986e-18,1.81081731112949e-17
45
"wbpJ",Inf,40.2169211528327,Inf,1.91874681973986e-18,1.81081731112949e-17
46
"wbpK",Inf,40.2169211528327,Inf,1.91874681973986e-18,1.81081731112949e-17
47
"wbpL",Inf,40.2169211528327,Inf,1.91874681973986e-18,1.81081731112949e-17
48
"wbpR",0,0,0.217293996241935,1.00934062720629e-05,3.71732767580854e-05
49
"wzx",Inf,40.2169211528327,Inf,1.91874681973986e-18,1.81081731112949e-17
50
"wzy",Inf,40.2169211528327,Inf,1.91874681973986e-18,1.81081731112949e-17
51
"wzz",Inf,7.18405260099211,Inf,1.16324524506727e-07,6.27321542875563e-07
52
"xcpQ",0.241921352352295,0.0794904101991794,0.676148723190473,0.00326026545819646,0.0107021757432101
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