Project

General

Profile

Files » checkm.o1851691.txt

Bin QC report generated using checkM (see Issues) - Katie Lennard, 05/16/2018 02:38 PM

 
1
 Job started on srvslshpc615 at Tue May 15 17:27:27 SAST 2018
2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
  Bin Id                              Marker lineage           # genomes   # markers   # marker sets    0     1     2     3    4    5+   Completeness   Contamination   Strain heterogeneity  
4
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
  b92_scaffold_IDs.matches         k__Bacteria (UID203)           5449        104            58         0     0     1    103   0    0       100.00          198.28              0.97          
6
  b8_scaffold_IDs.matches              root (UID1)                5656         56            24         0     1     13    12   16   14      100.00          273.69             27.45          
7
  b89_scaffold_IDs.matches        k__Bacteria (UID2372)           131         177           106         0    177    0     0    0    0       100.00           0.00               0.00          
8
  b73_scaffold_IDs.matches         k__Bacteria (UID203)           5449        104            58         0     2     85    14   3    0       100.00          117.99             14.48          
9
  b63_scaffold_IDs.matches         k__Bacteria (UID203)           5449        104            58         0     5     95    4    0    0       100.00          98.18               2.80          
10
  b57_scaffold_IDs.matches         k__Bacteria (UID203)           5449        103            57         0     9     45    49   0    0       100.00          121.29             19.79          
11
  b50_scaffold_IDs.matches         k__Bacteria (UID203)           5449        104            58         0     25    42    25   9    3       100.00          148.59              8.96          
12
  b46_scaffold_IDs.matches             root (UID1)                5656         56            24         0     0     56    0    0    0       100.00          100.00              0.00          
13
  b27_scaffold_IDs.matches         k__Bacteria (UID203)           5449        103            57         1     23    78    1    0    0       99.84           91.55               9.88          
14
  b81_scaffold_IDs.matches     o__Lactobacillales (UID544)        293         475           267         2    467    6     0    0    0       99.50            1.44              100.00         
15
  b4_scaffold_IDs.matches       o__Clostridiales (UID1212)        172         263           149         1    261    1     0    0    0       99.33            0.67               0.00          
16
  b49_scaffold_IDs.matches      o__Clostridiales (UID1212)        172         263           149         1    257    5     0    0    0       99.33            2.41              20.00          
17
  b33_scaffold_IDs.matches      o__Bacteroidales (UID2657)        160         492           269         2    490    0     0    0    0       99.26            0.00               0.00          
18
  b79_scaffold_IDs.matches      o__Clostridiales (UID1226)        155         278           158         3    273    2     0    0    0       99.03            0.95               0.00          
19
  b55_scaffold_IDs.matches      o__Clostridiales (UID1212)        172         263           149         11   246    6     0    0    0       98.49            1.95              33.33          
20
  b14_scaffold_IDs.matches   f__Bifidobacteriaceae (UID1462)       65         476           217         6    439    29    1    1    0       98.43            7.27              81.58          
21
  b64_scaffold_IDs.matches         k__Bacteria (UID203)           5449        104            58         1     62    34    7    0    0       98.28           63.64              89.09          
22
  b91_scaffold_IDs.matches     f__Lachnospiraceae (UID1286)        57         420           207         5    399    16    0    0    0       98.23            1.96              50.00          
23
  b37_scaffold_IDs.matches        k__Bacteria (UID2372)           131         177           106         3    150    24    0    0    0       98.11           12.17              83.33          
24
  b53_scaffold_IDs.matches         k__Bacteria (UID203)           5449        104            58         8     44    47    5    0    0       98.04           68.79              95.16          
25
  b58_scaffold_IDs.matches        k__Bacteria (UID2982)            88         229           147         4    217    8     0    0    0       97.93            3.57              87.50          
26
  b83_scaffold_IDs.matches      o__Bacteroidales (UID2654)        163         486           266         7    401    74    4    0    0       97.74           17.67               9.30          
27
  b5_scaffold_IDs.matches       o__Clostridiales (UID1342)         32         340           177         15   321    4     0    0    0       97.70            1.32              25.00          
28
  b70_scaffold_IDs.matches   f__Enterobacteriaceae (UID5121)      138         1162          336         55   1069   38    0    0    0       97.57            3.26              84.21          
29
  b85_scaffold_IDs.matches   f__Enterobacteriaceae (UID5124)      134         1173          336         35   1100   38    0    0    0       97.52            2.19              89.47          
30
  b69_scaffold_IDs.matches       p__Firmicutes (UID1022)          100         295           158         4    287    4     0    0    0       97.47            1.92              25.00          
31
  b43_scaffold_IDs.matches      o__Clostridiales (UID1226)        155         278           158         35   238    5     0    0    0       97.47            1.74              40.00          
32
  b56_scaffold_IDs.matches     f__Lachnospiraceae (UID1256)        33         333           171         6    318    9     0    0    0       97.47            2.92              88.89          
33
  b68_scaffold_IDs.matches      o__Clostridiales (UID1212)        172         257           149         8    245    4     0    0    0       96.76            0.92              25.00          
34
  b76_scaffold_IDs.matches      o__Clostridiales (UID1226)        155         278           158         8    266    4     0    0    0       96.73            1.90              25.00          
35
  b2_scaffold_IDs.matches       o__Clostridiales (UID1212)        172         263           149         38   218    6     1    0    0       95.81            3.52              77.78          
36
  b26_scaffold_IDs.matches         k__Bacteria (UID203)           5449        103            57         10    39    25    14   10   5       91.63           122.95             16.38          
37
  b20_scaffold_IDs.matches        k__Bacteria (UID2982)            88         229           147         35   188    6     0    0    0       89.86            3.40              33.33          
38
  b86_scaffold_IDs.matches   f__Bifidobacteriaceae (UID1462)       65         476           217         67   372    35    2    0    0       87.19           10.29              87.80          
39
  b42_scaffold_IDs.matches      o__Clostridiales (UID1212)        172         261           147         44   197    19    1    0    0       87.17            5.77              54.55          
40
  b10_scaffold_IDs.matches         k__Bacteria (UID203)           5449        103            57         16    40    36    10   1    0       85.89           60.98               9.72          
41
  b0_scaffold_IDs.matches    f__Bifidobacteriaceae (UID1458)       77         464           220        121   337    6     0    0    0       75.72            0.79              33.33          
42
  b39_scaffold_IDs.matches      o__Clostridiales (UID1212)        172         263           149         53   203    7     0    0    0       75.56            3.41               0.00          
43
  b1_scaffold_IDs.matches          k__Bacteria (UID203)           5449        103            58         39    26    25    13   0    0       75.09           70.38              84.38          
44
  b51_scaffold_IDs.matches      o__Clostridiales (UID1120)        304         250           143         77   170    3     0    0    0       63.16            1.07              33.33          
45
  b30_scaffold_IDs.matches      o__Clostridiales (UID1212)        172         257           149         78   175    4     0    0    0       62.90            0.96               0.00          
46
  b40_scaffold_IDs.matches   f__Bifidobacteriaceae (UID1462)       65         476           217        227   243    6     0    0    0       58.99            1.40              16.67          
47
  b19_scaffold_IDs.matches         k__Bacteria (UID203)           5449        103            57         41    30    17    11   4    0       46.19           25.70              12.16          
48
  b18_scaffold_IDs.matches     f__Pasteurellaceae (UID4932)        83         767           440        397   314    54    2    0    0       45.85            7.09              36.67          
49
  b24_scaffold_IDs.matches         k__Bacteria (UID203)           5449        104            58         78    25    1     0    0    0       42.24            1.72               0.00          
50
  b72_scaffold_IDs.matches         k__Bacteria (UID203)           5449        104            58         41    36    12    7    0    8       40.88           23.12              30.77          
51
  b21_scaffold_IDs.matches         k__Bacteria (UID203)           5449        104            58         77    27    0     0    0    0       39.66            0.00               0.00          
52
  b32_scaffold_IDs.matches         k__Bacteria (UID203)           5449        103            57         75    27    1     0    0    0       38.36            1.75               0.00          
53
  b74_scaffold_IDs.matches             root (UID1)                5656         56            24         28    1     25    2    0    0       29.17           29.17               0.00          
54
  b36_scaffold_IDs.matches   f__Bifidobacteriaceae (UID1462)       65         476           217        331   139    6     0    0    0       28.00            1.17              50.00          
55
  b12_scaffold_IDs.matches         k__Bacteria (UID203)           5449        103            57         85    18    0     0    0    0       27.19            0.00               0.00          
56
  b90_scaffold_IDs.matches       g__Prevotella (UID2721)           65         530           280        360   170    0     0    0    0       24.25            0.00               0.00          
57
  b95_scaffold_IDs.matches     o__Lactobacillales (UID374)        471         350           191        257    84    9     0    0    0       23.71            3.42              11.11          
58
  b67_scaffold_IDs.matches      o__Clostridiales (UID1120)        304         250           143        177    66    7     0    0    0       23.25            1.23              14.29          
59
  b59_scaffold_IDs.matches      o__Clostridiales (UID1226)        155         274           157        201    64    8     1    0    0       21.86            1.32               9.09          
60
  b28_scaffold_IDs.matches         k__Bacteria (UID203)           5449        103            57         77    26    0     0    0    0       21.07            0.00               0.00          
61
  b66_scaffold_IDs.matches         k__Bacteria (UID203)           5449        103            57         65    22    12    4    0    0       18.88            5.34               0.00          
62
  b35_scaffold_IDs.matches         k__Bacteria (UID203)           5449        104            58         94    10    0     0    0    0        9.28            0.00               0.00          
63
  b38_scaffold_IDs.matches         k__Bacteria (UID203)           5449        104            58         92    12    0     0    0    0        5.72            0.00               0.00          
64
  b17_scaffold_IDs.matches         k__Bacteria (UID203)           5449        102            57         99    3     0     0    0    0        5.26            0.00               0.00          
65
  b48_scaffold_IDs.matches             root (UID1)                5656         56            24         55    1     0     0    0    0        4.17            0.00               0.00          
66
  b62_scaffold_IDs.matches         k__Bacteria (UID203)           5449        104            58        100    4     0     0    0    0        3.61            0.00               0.00          
67
  b11_scaffold_IDs.matches         k__Bacteria (UID203)           5449        104            58        102    2     0     0    0    0        2.59            0.00               0.00          
68
  b16_scaffold_IDs.matches         k__Bacteria (UID203)           5449         98            58         96    1     1     0    0    0        1.72            0.86              100.00         
69
  b9_scaffold_IDs.matches          k__Bacteria (UID203)           5449         98            58         97    1     0     0    0    0        0.86            0.00               0.00          
70
  b34_scaffold_IDs.matches         k__Bacteria (UID203)           5449        104            58        101    3     0     0    0    0        0.47            0.00               0.00          
71
  b94_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
72
  b93_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
73
  b88_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
74
  b87_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
75
  b84_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
76
  b82_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
77
  b80_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
78
  b7_scaffold_IDs.matches              root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
79
  b78_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
80
  b77_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
81
  b75_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
82
  b71_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
83
  b6_scaffold_IDs.matches              root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
84
  b65_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
85
  b61_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
86
  b60_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
87
  b54_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
88
  b52_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
89
  b47_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
90
  b45_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
91
  b44_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
92
  b41_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
93
  b3_scaffold_IDs.matches              root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
94
  b31_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
95
  b29_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
96
  b25_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
97
  b23_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
98
  b22_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
99
  b15_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
100
  b13_scaffold_IDs.matches             root (UID1)                5656         56            24         56    0     0     0    0    0        0.00            0.00               0.00          
101
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
102
Job Ended at Tue May 15 18:07:11 SAST 2018
(4-4/6)