Tychus pipeline ran successfully for E. coli and Pseudomonas

The Tychus pipeline alignment and assembly modules were successfully implemented on Ilifu and run on the full datasets provided
Added by Katie Lennard about 6 years ago

The results can be found on Ilifu /ceph/cbio/users/katie/Nicol/ and have been transferred to medmicro's Athena server. Furthermore, FastQC and multiqc was again performed on reads after adapter removal and quality trimming/filtering, and results transferred to Athena: