Setting up a portable metagenome assembly pipeline for CBIO

05/18/2018

09:25 AM bin_qa_plot.png

CheckM bin QC summary plot Katie Lennard

05/16/2018

02:38 PM checkm.e1851691.txt

checkM run report (see Issues) Katie Lennard

02:38 PM checkm.o1851691.txt

Bin QC report generated using checkM (see Issues) Katie Lennard

05/07/2018

10:50 AM scripts_for_redmine.tar

See Wiki for details - pipeline development scripts Katie Lennard

04/20/2018

02:19 PM ismej201625a.pdf

Paper sent by Ulas: their study to demonstrate pipeline we'll be using Katie Lennard

02:18 PM Genome Res.-2013-Sharon-111-20.pdf

Paper sent by Ulas: a study that used the pipeline we'll be using Katie Lennard