Pathogen outbreak study - Pseudomonas single isolate WGS

01/31/2019

05:16 PM Feature #69 (New): Implement/adapt Tychus Nextflow pipeline

A nextflow pipeline, Tychus, was identified for use with this project.
## To do:
* Convert pipeline docker image... Katie Lennard

10:18 AM E. coli test data description from Clinton

We will use this test data to setup a single isolate assembly pipeline for the Pseudomonas WGS data that still needs ... Katie Lennard