Redmine

05/18/2018

09:25 AM Setting up a portable metagenome assembly pipeline for CBIO bin_qa_plot.png

CheckM bin QC summary plot Katie Lennard

05/16/2018

02:38 PM Setting up a portable metagenome assembly pipeline for CBIO checkm.e1851691.txt

checkM run report (see Issues) Katie Lennard

02:38 PM Setting up a portable metagenome assembly pipeline for CBIO checkm.o1851691.txt

Bin QC report generated using checkM (see Issues) Katie Lennard

05/07/2018

10:50 AM Setting up a portable metagenome assembly pipeline for CBIO scripts_for_redmine.tar

See Wiki for details - pipeline development scripts Katie Lennard

04/23/2018

06:00 PM Testing Redmine project features Screenshot_from_2018-04-23_17-29-13.png

Gerrit Botha

05:52 PM Testing Redmine project features Screenshot from 2018-04-23 17-29-13.png

Test screenshot Gerrit Botha

05:29 PM Setting up a portable RNA-Seq pipeline for CBIO Screenshot from 2018-04-23 17-29-13.png

RNAseq results output Gerrit Botha

04/20/2018

02:19 PM Setting up a portable metagenome assembly pipeline for CBIO ismej201625a.pdf

Paper sent by Ulas: their study to demonstrate pipeline we'll be using Katie Lennard

02:18 PM Setting up a portable metagenome assembly pipeline for CBIO Genome Res.-2013-Sharon-111-20.pdf

Paper sent by Ulas: a study that used the pipeline we'll be using Katie Lennard