Redmine

06/01/2018

12:03 PM Setting up a portable metagenome assembly pipeline for CBIO 41.50 hours (Project: Setting up a portable metagenome assembly pipeline for CBIO)

Balance of total hours spent on WGS development by end of May Katie Lennard

11:58 AM Setting up a portable 16S rDNA pipeline for CBIO 37.00 hours (Feature #54 (New): DADA2 workflow as an additional option for processing 16S data)

Total time spent by end of May Katie Lennard

11:56 AM Setting up a portable RNA-Seq pipeline for CBIO 37.00 hours (Project: Setting up a portable RNA-Seq pipeline for CBIO)

Total time spent by end of May Katie Lennard

05/31/2018

02:51 PM Setting up a portable metagenome assembly pipeline for CBIO 28.50 hours (Project: Setting up a portable metagenome assembly pipeline for CBIO)

hours spent for May Katie Lennard

05/17/2018

01:43 PM Setting up a portable 16S rDNA pipeline for CBIO 1.00 hour (Feature #52 (New): Cleaning up current pipeline outputs for easier management downstream, finalise protocol of metadata sharing between sequencing, pipeline processing and statistical analysis)

Going through Sugnet's issues in regards to data cleaning Gerrit Botha