Testing human WGS alignment, calling and joint calling on DRAGEN hardware

04/11/2018

01:26 PM Support #23: Test the DRAGEN GATK best practice workflow on a WGS GiaB sample

Jon this message is from Nicky.
"Ok so the evaluation is done already. We need to decide if we need to make use of... Gerrit Botha

12:56 PM Support #23: Test the DRAGEN GATK best practice workflow on a WGS GiaB sample

I found out that they have already compared Dragen to GATK and BWA using the Platinum genomes trio, the accuracy and ... Jon Ambler

04/09/2018

04:37 PM Support #23: Test the DRAGEN GATK best practice workflow on a WGS GiaB sample

We had a BST meeting. Seems like there is a slight diversion from the original plan and suggestions made. Maybe bette... Gerrit Botha

03/22/2018

01:22 PM Support #23: Test the DRAGEN GATK best practice workflow on a WGS GiaB sample

Ok Gerrit Botha

11:02 AM Support #23: Test the DRAGEN GATK best practice workflow on a WGS GiaB sample

Hi Gerrit,
I'm just waiting on the CPGR to give me a time to come in so they can show me the system.
Jon Ambler

03/20/2018

12:02 PM Support #23: Test the DRAGEN GATK best practice workflow on a WGS GiaB sample

Hi Jon,
Just want to check how it is going with this and if you need any help?
Regards,
Gerrit Gerrit Botha

03/13/2018

11:24 AM Support #23 (Resolved): Test the DRAGEN GATK best practice workflow on a WGS GiaB sample

We need to test [this workflow](http://edicogenome.com/pipelines/gatk-best-practices-workflow-on-dragen).
The samp... Gerrit Botha