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Ephie Geza, 06/27/2023 09:29 AM

1 1 Ephie Geza
# Wiki
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## Input files
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The data consist of the expression data and barcodes with their corresponding location coordinates of two Pucks.
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1. Gene expression matrix - contains genes by bead barcodes
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Puck_[number].matched.digital_expression.txt.gz 
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2. Barcode_matching folder - this contains locations and corrected bead barcode sequences. The corrected sequence will be used in the gene expression matrix
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Puck_[puck number]_barcode_matching.txt.gz