Activity

From 02/18/2018 to 03/19/2018

04:39 PM Setting up a portable RNA-Seq pipeline for CBIO Support #24: Setting up the NGI-RNAseq pipeline on UCT Hex: Katie I've talked to Chris Fields he is working with Jenny. He will check if he can make their pipeline available. He... Gerrit Botha
03:07 PM Setting up a portable RNA-Seq pipeline for CBIO Support #25: Configure NGI-RNAseq pipeline to run on hex: Katie just a note. The section `singularity.cacheDir = "/scratch/DB/bio/singularity-containers` in our `config.txt` i... Gerrit Botha
02:55 PM Setting up a portable RNA-Seq pipeline for CBIO Support #25 (In Progress): Configure NGI-RNAseq pipeline to run on hex: Pertinent points for setup of NGI-RNAseq pipeline on UCT hex
*Main pipeline source code is at https://github.com/Sci... Katie Lennard

10:13 PM Setting up a portable RNA-Seq pipeline for CBIO Support #24 (New): Setting up the NGI-RNAseq pipeline on UCT Hex: Katie received a support request to analyse human RNA-Seq data. We do not have a pipeline ready for just pushing RNA-... Gerrit Botha

11:24 AM Testing human WGS alignment, calling and joint calling on DRAGEN hardware Support #23 (Resolved): Test the DRAGEN GATK best practice workflow on a WGS GiaB sample: We need to test [this workflow](http://edicogenome.com/pipelines/gatk-best-practices-workflow-on-dragen).
The samp... Gerrit Botha

03:04 PM Setting up the BST helpdesk Feature #14: Add page describing different types of collaboration: This was also just to test the markdown on the categories, and we can move it to its own category if needed. I've add... Jon Ambler
12:26 PM Setting up the BST helpdesk Feature #14: Add page describing different types of collaboration: Didn't we agree that this should be added as another category on the knowledgebase page. Also the knowledgebase page ... Gerrit Botha
11:44 AM Setting up the BST helpdesk Feature #14 (In Progress): Add page describing different types of collaboration: The descriptions can be refined, but they cover the three types of collaboration. Jon Ambler
10:16 AM Setting up the BST helpdesk Bug #13 (Closed): Find and remove any hard-coded links: Jon Ambler

12:13 PM Setting up the BST helpdesk Bug #13 (Resolved): Find and remove any hard-coded links: Jon Ambler

Also available in: Atom

Redmine