Redmine

05/22/2018

05:13 PM Setting up a portable 16S rDNA pipeline for CBIO Feature #52: Cleaning up current pipeline outputs for easier management downstream, finalise protocol of metadata sharing between sequencing, pipeline processing and statistical analysis

Ok Samson I've asked Shantelle also to give some input in the document. Once she has done all of us can maybe meet an... Gerrit Botha

02:12 PM Setting up a portable 16S rDNA pipeline for CBIO Feature #54: DADA2 workflow as an additional option for processing 16S data

Hi Katie,
I think it is definitely better to keep the config and code separate as the RNASeq Nextflow pipeline. Fo... Gerrit Botha

05/21/2018

04:47 PM Setting up a portable 16S rDNA pipeline for CBIO Feature #52: Cleaning up current pipeline outputs for easier management downstream, finalise protocol of metadata sharing between sequencing, pipeline processing and statistical analysis

Hi Samson,
I started looking at the document and added some comments on request. Can you please have a look.
Ge... Gerrit Botha