Activity

From 05/21/2019 to 06/19/2019

12:53 PM Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support #81 (Resolved): Full run on ilifu of RNA seq pipeline: The last 8 samples ran successfully, it was the max runtime that was an issue for the genebody_coverage process where... Jon Ambler

02:27 PM Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support #90 (In Progress): QC of aligned reads: The QC looks good, but there are a few samples with results that warrant further investigation. Some samples also had... Jon Ambler
11:34 AM Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support #90 (Resolved): QC of aligned reads: A QC report was generated by MultiQC. All samples need to be checked to make sure there were no problems and the data... Jon Ambler
11:32 AM Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support #81 (In Progress): Full run on ilifu of RNA seq pipeline: The full run completed, but 8 processed failed.The Nextflow report claims that the run was successful, despite the er... Jon Ambler

03:11 PM Pathogen outbreak study - Pseudomonas single isolate WGS CBIO_bioinformatics_support_request CM 28 Jan 2019.docx: CBIO support request Katie Lennard
03:01 PM Pathogen outbreak study - Pseudomonas single isolate WGS Updated results available for kSNP3 phylogenetic tree: The alignment.nf module was edited so that additional reference genomes could be added to the pipeline and used to ge... Katie Lennard

02:10 PM Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support #86 (Resolved): Analyze keloid proteomics data with mqmetaproteomics pipeline on ilifu: Metaproteomic analysis docker container pulled to ilifu and converted to singularity image, latest InterPro scan inst... Thys Potgieter

11:10 AM Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support #85 (Resolved): MaxQuant run of raw proteomics data: 98 RAW files processed with MaxQuant. Thys Potgieter

12:57 PM Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support #82 (Resolved): Preliminary analysis of Proteome identification data: Thys Potgieter

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