Support #77
Testing pipeline on subset of data
Status:
Resolved
Priority:
High
Assignee:
Jon Ambler
Description
We are going to test the pipeline on a subset of the samples to make sure that the pipeline is functioning correctly.
Selected GSH-N-001 for testing, cell sample.
/ceph/cbio/users/jambler/Clean/GSH-N-001
History
Updated by Jon Ambler almost 6 years ago
- Status changed from New to In Progress
- Priority changed from Normal to High
- % Done changed from 0 to 90
After dealing with some java issues, the pipeline ran through successfully.
The QC results look mostly good, just confirming some details on the strandedness of the dataset.
Updated by Jon Ambler almost 6 years ago
- Status changed from In Progress to Resolved
- % Done changed from 90 to 100
Strandedness is correct, pipeline ready for full dataset.