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From 04/10/2019 to 05/09/2019

05/09/2019

04:29 PM Support #79 (In Progress): Uploading new data from BGI
Uploading the data directly to ilifu from the BGI ftp server. Jon Ambler
04:28 PM Support #79 (Resolved): Uploading new data from BGI
New samples on the BGI server need to be uploaded. Login details contained in an email.
Jon Ambler
04:26 PM Support #77 (In Progress): Testing pipeline on subset of data
After dealing with some java issues, the pipeline ran through successfully.
The QC results look mostly good, just...
Jon Ambler
03:12 PM Support #78 (Resolved): Proteomics raw data uploaded to Blackburn Lab researchdata
Files uploaded to:
/mnt/researchdata/BLACKBURNLAB/2019/Collaborations/Thys/keloid
Thys Potgieter

05/03/2019

09:55 AM Support #77 (Resolved): Testing pipeline on subset of data
We are going to test the pipeline on a subset of the samples to make sure that the pipeline is functioning correctly.... Jon Ambler
09:40 AM Support #73 (Closed): Initial meeting
Jon Ambler
09:39 AM Support #74 (Resolved): Uploading of data
All samples uploaded
1 sample failed checksum
Clean/GSH-FKN-002/CL100118345_L2_WHHUMyhwEACYRAA-588_2.fq.gz
re-upl...
Jon Ambler

04/29/2019

09:44 AM Support #74: Uploading of data
Started upload of the data to Ilifu.
Location:
/ceph/cbio/users/jambler
Jon Ambler

04/26/2019

10:52 AM Support #74: Uploading of data
Ok the private folder is there on Ilifu now. Gerrit Botha

04/25/2019

04:57 PM Support #73 (Resolved): Initial meeting
Relebohile outlined the study design, and elaborated on the research questions they are seeking to answer.
We outlin...
Jon Ambler
04:45 PM Support #74: Uploading of data

I've requested to setup a POSIX group for this project (`cbio-002`) on Ilifu.
Jon for now you can move the data ...
Gerrit Botha
04:39 PM Support #74 (Resolved): Uploading of data
Getting data onto Ilifu Gerrit Botha

04/24/2019

12:25 PM BST_bioinformatics_service_questionnaire_RM.docx
Support request form Jon Ambler
11:42 AM Support #73 (Closed): Initial meeting
A meeting has been arranged for the 25/04/19 at 15:00 to discuss the project.
Jon Ambler
 

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