Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN)

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Support #74: Uploading of data

Support #77: Testing pipeline on subset of data

Support #78: Proteomics raw data uploaded to Blackburn Lab researchdata

Support #79: Uploading new data from BGI

Support #80: Renaming all files according to the experiments

Support #81: Full run on ilifu of RNA seq pipeline

Support #82: Preliminary analysis of Proteome identification data

Support #85: MaxQuant run of raw proteomics data

Support #86: Analyze keloid proteomics data with mqmetaproteomics pipeline on ilifu

Support #90: QC of aligned reads

Support #92: Differential expression analysis

Feature #93: Improve normalization and imputaiton of tissue sample proteomics data and visualization

Support #100: Time seres analysis

Support #101: Secondary analysis: Transcription factor and pathway enrichment

Feature #103: Median group intensity added to output for visualization of proteomics target expression profiles

Feature #104: Summary table of mRNA and proteomics analysis for identified gene targets, protein level mean abundance per group added.

Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN)

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