Activity
From 06/09/2019 to 07/08/2019
07/02/2019
- 11:36 AM Support #90: QC of aligned reads
- When the differential expression analysis was run, the samples were clustering in two distinct groups.
Looking in... - 11:28 AM Support #92 (In Progress): Differential expression analysis
- A list of the top differentially expressed genes have been created for the tissue data set.
This set includes gene... - 09:22 AM Support #86 (Resolved): Analyze keloid proteomics data with mqmetaproteomics pipeline on ilifu
- 09:16 AM Support #85 (Resolved): MaxQuant run of raw proteomics data
06/24/2019
- 04:42 PM Support #92: Differential expression analysis
- Including this into the first python script so merging and splitting by experiment into the required files takes plac...
- 04:40 PM Support #92: Differential expression analysis
- Writing a script for this in python for repeatability.
- 04:38 PM Support #92 (Resolved): Differential expression analysis
- Conduct differential expression analysis on the samples.
The experiments are outlined in the RNAseq_analysis_8_Ma...
06/19/2019
- 12:53 PM Support #81 (Resolved): Full run on ilifu of RNA seq pipeline
- The last 8 samples ran successfully, it was the max runtime that was an issue for the genebody_coverage process where...
06/18/2019
- 02:27 PM Support #90 (In Progress): QC of aligned reads
- The QC looks good, but there are a few samples with results that warrant further investigation. Some samples also had...
- 11:34 AM Support #90 (Resolved): QC of aligned reads
- A QC report was generated by MultiQC. All samples need to be checked to make sure there were no problems and the data...
- 11:32 AM Support #81 (In Progress): Full run on ilifu of RNA seq pipeline
- The full run completed, but 8 processed failed.The Nextflow report claims that the run was successful, despite the er...
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