Project

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Overview

Project title
An atlas of blood regulators of liver fibrosis during schistosomiasis

People involved
Principal investigator : Dr Justin Nono
Student: Severin Kamdem
Bioinformatics support team: Katie Lennard

Short description of project
Metagenomics data was acquired for the same sample set as we have RNAseq and metabolomics data available. This is a subproject of Project 'RNAseq blood profiling of liver fibrosis during schistosomiasis'

Objectives
Preprocessing and downstream analysis of Ilumina .fastq reads using the nf-core/RNAseq pipeline https://github.com/kviljoen/RNAseq

  • Department: Immunology

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Members

Manager: Katie Lennard, Nicky Mulder