Overview
This project is closed and read-only.
Project title
The impact of fire and herbivores on soil microbes
People involved
Principal investigator : Heidi Hawkins
Support request made my: Marie-Liesse Vermeire
Bioinformatics support team: Katie Lennard
Short description of project
We study the impact of Fire and Herbivores on soil microbes, in savanna and grassland ecosystems of South Africa. Illumina 16S rRNA gene amplicon profiling used for microbiota profiling.
Objectives
We will use the dada2 pipeline to teach Marie-Liesse how to process the data.
Latest news
dada2 testrun on HPC successfull
After editing the necessary config files, a testrun on a small subset of samples was successfully performed by Marie-Liesse
Members
Manager: Katie Lennard, Nicky Mulder