Activity
From 05/15/2019 to 06/13/2019
06/10/2019
- CBIO support request
- 03:01 PM Pathogen outbreak study - Pseudomonas single isolate WGS Updated results available for kSNP3 phylogenetic tree
- The alignment.nf module was edited so that additional reference genomes could be added to the pipeline and used to ge...
06/01/2019
- 02:10 PM Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support #86 (Resolved): Analyze keloid proteomics data with mqmetaproteomics pipeline on ilifu
- Metaproteomic analysis docker container pulled to ilifu and converted to singularity image, latest InterPro scan inst...
05/31/2019
- 11:10 AM Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support #85 (Resolved): MaxQuant run of raw proteomics data
- 98 RAW files processed with MaxQuant.
05/21/2019
- 12:57 PM Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support #82 (Resolved): Preliminary analysis of Proteome identification data
05/17/2019
- 11:08 AM Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support #82 (In Progress): Preliminary analysis of Proteome identification data
- 11:04 AM Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support #82 (Resolved): Preliminary analysis of Proteome identification data
- Differential abundance analysis of preliminary data, PCA and heatmap generation.
- 10:58 AM Infant stool metaproteome analysis Support #75 (Resolved): Taxonomic profiling using BLAST of identified proteins and peptides
05/16/2019
- 10:52 AM Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support #81 (Resolved): Full run on ilifu of RNA seq pipeline
- Full run started on ilifu.
Output dir:
/ceph/cbio/users/jambler/full_run
Execute script used:
/ceph/cbio/use...
05/15/2019
- 09:28 AM Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support #80 (Resolved): Renaming all files according to the experiments
- Files uploaded and renamed successfully.
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