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# Project Tracker Status Priority Subject Assignee Updated
100 Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support Resolved High Time seres analysis Jon Ambler 10/04/2019 01:25 PM Actions
93 Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Feature Resolved High Improve normalization and imputaiton of tissue sample proteomics data and visualization Thys Potgieter 08/05/2019 02:06 PM Actions
92 Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support Resolved Urgent Differential expression analysis Jon Ambler 10/04/2019 01:19 PM Actions
90 Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support Resolved High QC of aligned reads Jon Ambler 10/04/2019 01:30 PM Actions
86 Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support Resolved High Analyze keloid proteomics data with mqmetaproteomics pipeline on ilifu Thys Potgieter 07/02/2019 09:22 AM Actions
85 Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support Resolved High MaxQuant run of raw proteomics data Thys Potgieter 07/02/2019 09:16 AM Actions
82 Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support Resolved High Preliminary analysis of Proteome identification data Thys Potgieter 05/21/2019 12:57 PM Actions
81 Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support Resolved High Full run on ilifu of RNA seq pipeline Jon Ambler 06/19/2019 12:53 PM Actions
80 Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support Resolved High Renaming all files according to the experiments Jon Ambler 05/15/2019 09:28 AM Actions
79 Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support Resolved High Uploading new data from BGI Jon Ambler 05/13/2019 09:09 AM Actions
78 Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support Resolved Normal Proteomics raw data uploaded to Blackburn Lab researchdata Thys Potgieter 05/14/2019 10:30 AM Actions
77 Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support Resolved High Testing pipeline on subset of data Jon Ambler 05/13/2019 09:06 AM Actions
75 Infant stool metaproteome analysis Support Resolved Normal Taxonomic profiling using BLAST of identified proteins and peptides Thys Potgieter 05/17/2019 10:58 AM Actions
74 Identification of biomarkers in keloids and folliculitis keloidalis nuchae (FKN) Support Resolved Normal Uploading of data Jon Ambler 05/03/2019 09:39 AM Actions
69 Pathogen outbreak study - Pseudomonas single isolate WGS Feature New High Implement/adapt Tychus Nextflow pipeline Katie Lennard 01/31/2019 05:16 PM Actions
60 Setting up a portable metagenome assembly pipeline for CBIO Support New Normal Setup Nextflow metagenomics pipeline YAMP on hex 07/24/2018 12:13 PM Actions
58 The effect of tadpole-tail blastema extract on rhabdomyosarcoma Support New Normal Pathway analysis 07/10/2018 11:17 AM Actions
57 The effect of tadpole-tail blastema extract on rhabdomyosarcoma Support New Normal Perform proteomics differential abundance testing 07/05/2018 11:18 AM Actions
56 Testing human WGS alignment, calling and joint calling on DRAGEN hardware Bug New Normal Get pipeline details for getting data in and out. Jon Ambler 06/04/2018 12:39 PM Actions
54 Setting up a portable 16S rDNA pipeline for CBIO Feature New Normal DADA2 workflow as an additional option for processing 16S data 06/22/2018 02:51 PM Actions
53 Setting up a portable 16S rDNA pipeline for CBIO Feature New Normal Setup a decontamination pipeline for Mark's project Samson Kilaza 06/07/2018 02:37 PM Actions
52 Setting up a portable 16S rDNA pipeline for CBIO Feature New Normal Cleaning up current pipeline outputs for easier management downstream, finalise protocol of metadata sharing between sequencing, pipeline processing and statistical analysis Samson Kilaza 05/22/2018 05:13 PM Actions
50 Setting up a portable metagenome assembly pipeline for CBIO Support New Normal Validate binning using single copy core genes 05/16/2018 02:41 PM Actions
46 Setting up a portable metagenome assembly pipeline for CBIO Bug New Normal Read binning with CONCOCT 04/30/2018 04:00 PM Actions
45 Setting up a portable metagenome assembly pipeline for CBIO Support New Normal Quality trimming with Trimmomatic 04/26/2018 05:17 PM Actions
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